BIOinformaatika kodutöö 5
EISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKM
AENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLS
DAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA*
6) PCR Primer Stats
PCR Primer Stats results
Global settings:
-The primers do not have a 5'-phosphate group.
-Combined concentration of K+ and Na+ in the reaction = 50 millimolar.
-Mg+2 concentration in the reaction = 1.5 millimolar.
-Primer concentration in the reaction = 200 nanomolar.
7) Restriction Digest
Restriction Digest results
>326 bp linear fragment from linear parent eco:b2097 fbaB, dhnA; fructose-bisphosphate aldolase class I
[EC:4.1.2.13]; K01623 fructose-bisphosphate aldolase, class I (N), base 248 to base 573 (AluI ag|ct - AluI ag|ct).
cttcatttgctgctaacccgctctactttgacccgaaaaacattgttgaactggcgatcg
aagcgggctgtaactgtgtggcgtcaacttacggcgtgctggcgtcggtatcgcggcgtt
atgcgcatcgcattccattcctcgtcaaacttaatcacaacgagacgctaagttacccga