Järjestuste võrdlemine, otsingud andmebaasidest (BLAST, FASTA, SW).
2. sõna = 3, PAM30, gap 9/1
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding
environmental samples from WGS projects
Posted date: Apr 1, 2008 5:55 PM
Number of letters in database: -2,114,121,490
Number of sequences in database: 6,388,671
Lambda K H
0.340 0.284 1.71
Gapped
Lambda K H
0.294 0.110 0.610
Matrix: PAM30
Gap Penalties: Existence: 9, Extension: 1
Number of Sequences: 6388671
Number of Hits to DB: 292755462
Number of extensions: 22749798
Number of successful extensions: 23183
Number of sequences better than 100: 110
Number of HSP's better than 100 without gapping: 0
Number of HSP's gapped: 22470
Number of HSP's successfully gapped: 157
Length of query: 434
Length of database: 2180845802
Length adjustment: 35
Effective length of query: 399
Effective length of database: 1957242317
Effective search space: 780939684483
Effective search space used: 780939684483
T: 11
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