Järjestuste võrdlemine, otsingud andmebaasidest (BLAST, FASTA, SW).
translations+PDB+SwissProt+PIR+PRF excluding
environmental samples from WGS projects
Posted date: Apr 1, 2008 5:55 PM
Number of letters in database: -2,114,121,490
Number of sequences in database: 6,388,671
Lambda K H
0.231 0.0939 0.243
Gapped
Lambda K H
0.203 0.0410 0.120
Matrix: BLOSUM45
Gap Penalties: Existence: 15, Extension: 2
Number of Sequences: 6388671
Number of Hits to DB: 413908549
Number of extensions: 45854299
Number of successful extensions: 22765
Number of sequences better than 100: 190
Number of HSP's better than 100 without gapping: 0
Number of HSP's gapped: 21810
Number of HSP's successfully gapped: 190
Length of query: 434
Length of database: 2180845802
Length adjustment: 163
Effective length of query: 271
Effective length of database: 1139492429
Effective search space: 308802448259
Effective search space used: 308802448259
T: 11
A: 40
X1: 22 (7.3 bits)
X2: 51 (14.9 bits)
X3: 85 (24.9 bits)
annaabi.ee 
