Järjestuste võrdlemine, otsingud andmebaasidest (BLAST, FASTA, SW).
translations+PDB+SwissProt+PIR+PRF excluding
environmental samples from WGS projects
Posted date: Apr 1, 2008 5:55 PM
Number of letters in database: -2,114,121,490
Number of sequences in database: 6,388,671
Lambda K H
0.346 0.180 0.644
Gapped
Lambda K H
0.299 0.0710 0.270
Matrix: BLOSUM80
Gap Penalties: Existence: 10, Extension: 1
Number of Sequences: 6388671
Number of Hits to DB: 342647358
Number of extensions: 35058157
Number of successful extensions: 19113
Number of sequences better than 100: 288
Number of HSP's better than 100 without gapping: 0
Number of HSP's gapped: 18519
Number of HSP's successfully gapped: 299
Length of query: 434
Length of database: 2180845802
Length adjustment: 76
Effective length of query: 358
Effective length of database: 1695306806
Effective search space: 606919836548
Effective search space used: 606919836548
T: 11
A: 40
X1: 15 (7.5 bits)
X2: 34 (14.7 bits)
X3: 57 (24.6 bits)
annaabi.ee 
