Järjestuste võrdlemine, otsingud andmebaasidest (BLAST, FASTA, SW).
sõna = 3, PAM30, gap 5/2
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding
environmental samples from WGS projects
Posted date: Apr 1, 2008 5:55 PM
Number of letters in database: -2,114,121,490
Number of sequences in database: 6,388,671
Lambda K H
0.340 0.284 1.71
Gapped
Lambda K H
0.264 0.0790 0.450
Matrix: PAM30
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 6388671
Number of Hits to DB: 293554133
Number of extensions: 23161675
Number of successful extensions: 24748
Number of sequences better than 100: 147
Number of HSP's better than 100 without gapping: 0
Number of HSP's gapped: 23526
Number of HSP's successfully gapped: 161
Length of query: 434
Length of database: 2180845802
Length adjustment: 48
Effective length of query: 386
Effective length of database: 1874189594
Effective search space: 723437183284
Effective search space used: 723437183284
T: 11
A: 40
X1: 15 (7.3 bits)
X2: 39 (14
annaabi.ee 
