Järjestuste võrdlemine, otsingud andmebaasidest (BLAST, FASTA, SW).
environmental samples from WGS projects
Posted date: Mar 25, 2008 5:58 PM
Number of letters in database: -2,129,407,321
Number of sequences in database: 6,344,481
Lambda K H
0.343 0.282 1.59
Gapped
Lambda K H
0.294 0.110 0.610
Matrix: PAM30
Gap Penalties: Existence: 9, Extension: 1
Number of Sequences: 6344481
Number of Hits to DB: 12186341
Number of extensions: 227775
Number of successful extensions: 10959
Number of sequences better than 200000: 10715
Number of HSP's better than 200000 without gapping: 0
Number of HSP's gapped: 10957
Number of HSP's successfully gapped: 10957
Length of query: 15
Length of database: 2165559971
Length adjustment: 5
Effective length of query: 10
Effective length of database: 2133837566
Effective search space: 21338375660
Effective search space used: 21338375660
T: 11
A: 40
X1: 15 (7.4 bits)
X2: 35 (14.8 bits)
X3: 58 (24.6 bits)
S1: 32 (16.8 bits)
S2: 32 (16.8 bits)
b
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